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                        Recent 
                          and Selected Publications 
                          
                         I. Single Photon Source for Quantum Information Processing  
                        II. Self-Assembled Quantum Dots  and 
                          Infrared Detectors __  
                          III. Solar Energy Conversion using Novel 
                            Hybrid Nanostuctures   
                          IV. Biophysics, Bioengineering, and Nanomedicine 
                            ____ -Imaging of Cellular 
                            Processes 
                             ____-Cellular Prostheses
                            
                          V. Nanoparticle Manipulation on Surfaces  
  
                           Single Photon Source  for Quantum Information Processing  
                          
                          
                            - 
                              Q. Huang, L. Jordao,  S. Lu, S. Chattaraj, J. Zhang,  and A. Madhukar, "Large-Area 
                              Spatially Ordered Mesa Top Single Quantum Dots: Suitable Single Photon Emitters for 
                              On-Chip Integrated Quantum Information Processing Platforms." arXiv:2312.15132 (2023). 
                              [CLICK HERE]
                            
 
                            - 
                              J. Zhang, S. Chattaraj, Q. Huang, L. Jordao, S. Lu, and A. Madhukar, "On chip scalable
                              highly pure and indistinguishable single photon sources in ordered arrays: Path to 
                              Quantum Optical Circuits." Science Advances, 8.35, eabn9252 (2022).
                              [CLICK HERE]
                            
 
                            - 
                            J. Zhang, Q. Huang, L. Jordao, S. Chattaraj, S. Lu, and A. Madhukar, "Planarized spatially-regular arrays of spectrally uniform single quantum dots as on-chip single photon sources for quantum optical circuits." APL Photonics 5, 11, 116106 (2020).
                            [CLICK HERE]
                            
 
                            - 
                              S. Chattaraj, J. Zhang, S. Lu, and A. Madhukar. "On-Chip Integrated Single Photon Source-Optically Resonant Metastructure Based Scalable Quantum Optical Circuits." IEEE Journal of Quantum Electronics 56, 1, 1-9 (2019).
                          [CLICK HERE]
                            
 
                            - 
                              J. Zhang, S. Chattaraj, S. Lu, and A. Madhukar. "Highly pure single photon emission from spectrally uniform surface-curvature directed mesa top single quantum dot ordered array." Applied Physics Letters 114, 7, 071102 (2019). 
                           [CLICK HERE]
                            
 
                            - 
                              Chattaraj, S., Zhang, J., Lu, S., & Madhukar, A.  On-Chip Scalable Coupled Single Photon Emitter-All Dielectric Multifunctional Quantum Optical Circuits Working on a Single Collective Mie Resonance. arXiv preprint arXiv:1811.06652. (2018)
                              [CLICK HERE]
                            
 
                            - 
                              S. Chattaraj, J. Zhang, S. Lu, and A. Madhukar. "On-chip scalable coupled single photon emitter-all dielectric multifunctional quantum optical circuits working on a single collective Mie resonance." arXiv preprint arXiv:1811.06652 (2018).
                          [CLICK HERE]
                            
 
                            - 
                              S. Chattaraj, J. Zhang, S. Lu, and A. Madhukar. "Multifunctional Control of On-chip Generated Photons by a Single Collective Mode in Monolithically Integrated All-Dielectric Scalable Optical Circuits." arXiv preprint arXiv:1712.09700 (2017).
                              [CLICK HERE]
                            
 
                            - 
                              J. Zhang, S. Chattaraj, S. Lu and A. Madhukar,
                           "Mesa-top quantum dot single photon emitter arrays: Growth, optical characteristics, and the 
                           simulated optical response of integrated dielectric nanoantenna-waveguide systems", J. Appl. Phys. 120, 243103 (2016). 
                           [CLICK HERE]
                            
 
                            - 
                              J. Zhang, S. Lu, S. Chattaraj and A. Madhukar, "Triggered single photon emission up to 77K from ordered array of surface curvature-directed mesa-top GaAs/InGaAs single quantum dots", Optic Express 24, 29955(2016). 
                              [CLICK HERE]
                            
 
                            - 
                              S. Chattaraj and A. Madhukar, "Multifunctional all-dielectric nano-optical systems using collective multipole Mie resonances: toward on-chip integrated nanophotonics", J. Opt. Soc. Am. B, 33, 2414(2016).
                              [CLICK HERE]
                            
 
                            - 
                              J. Zhang, S. Lu, Z. Lingley and A. Madhukar, “Nanotemplate-Directed InGaAs/GaAs Quantum Dots: Towards Single Photon Emitter Arrays”, J. Vac. Sci. Technol. B, 32, 02C106 (2014).
                              [CLICK 
                                HERE]
                            
 
                        - A. Konkar, A. Madhukar, and P. Chen "Creating 
                          Three-Dimensionally Confined Nanoscale Strained Structures 
                          via Substrate Encoded Size Reducing Epitaxy and the 
                          Enhancement of Critical Thickness of Island Formation" 
                          Mat. Res. Soc. Symp. Proc v 380 (1998) [CLICK 
                          HERE]
 
                        - A. Konkar, A. Madhukar, and P. Chen, "Stress-engineered 
                          spatially selective self-assembly of strained InAs quantum 
                          dots on nonplanar patterned GaAs(001) substrates." 
                          Applied Physics Letters 72, 220 (1998) [CLICK 
                          HERE]
 
                        - K.C. Rajkumar, A. Madhukar, P. Chen, A. Konkar, 
                          L. Chen, K. Rammohan, D.H. Rich, "Realization of 
                          Three-Dimensionally Confined Structures via OneStep 
                          In-Situ MBE on Appropriately Patterned GaAs (111)." 
                          JVSTB 12 (2) 1071 (1994). [CLICK 
                          HERE]
 
                        - A. Madhukar, "Growth of semiconductor heterostructures 
                          on patterned substrates - defect reduction and nanostructures." 
                          Thin Solid Films 231, 8 (1993). [CLICK 
                          HERE]
 
                        - S. Guha, A. Madhukar, K. Kaviani, Li Chen, R. Kuchibholtla, 
                          R. Kapre, M. Hyugachi, Z. Xie, "Molecular Beam 
                          Epitaxical Growth of AlxGa1-xAs on Non-Planar Patterned 
                          GaAs (100)" Mat. Res. Soc. Symp. Proc. v 145 (1989)
 
                        - M.A. Makeev and A. Madhukar, 
                          "Stress Relaxation in Lattice-Mismatched Semiconductor 
                          Overlayers on Patterned Substrates: Atomistic Simulation 
                          Studies"in "Handbook of Semiconductor 
                          Nanostructures and Nanodevices," Eds. A.A. Balandin 
                          and K.L. Wang, American Scientific Publishers, vol X, 
                          ch. 7 (2006) 
 
                        - Maxim A. Makeev, and Anupam Madhukar, "Calculation 
                          of Vertical Correlation Probability in Ge/Si(001) Shallow 
                          Island Quantum Dot Multilayer Systems." Nano Letters, 
                          6 , 1279 (2006) [CLICK 
                          HERE]
 
                        - Maxim A. Makeev, Rajiv K. Kalia, Aiichiro Nakano, 
                          Priya Vashishta, and Anupam Madhukar, "Effect of 
                          geometry on stress relaxation in InAs/GaAs rectangular 
                          nanomesas: Multimillion-atom molecular dynamics simulations." 
                          Journal of Applied Physics, 98 , 114313 (2005) [CLICK 
                          HERE]
 
                        - M. Makeev, W. Yu, and A. Madhukar, "Atomic 
                          scale stresses and strains in Ge/Si(001) nanopixels: 
                          An atomistic simulation study." Journal of Applied 
                          Physics 96, 4429 (2004) [CLICK 
                          HERE]
 
                        - M. Makeev, W. Yu, and A. Madhukar, "Stress 
                          distributions and energetics in the laterally ordered 
                          systems of buried pyramidal Ge/Si(001) islands: An atomistic 
                          simulation study." Physical Review B 68, 195301 
                          (2003) [CLICK 
                          HERE]
 
                        - X. Su, R.K. Kalia, A. Nakano, P. Vashishta, and 
                          A. Madhukar, "InAs/GaAs square nanomesas: Multimillion-atom 
                          molecular dynamics simulations on parallel computers." 
                          Journal of Applied Physics 94, 6762 (2003) [CLICK 
                          HERE]
 
                        - M. Makeev and A. Madhukar, "Large-scale atomistic 
                          simulations of atomic displacements, stresses, and strains 
                          in nanoscale mesas: Effect of mesa edges, corners, and 
                          interfaces." Applied Physics Letters 81, 3789 (2002) 
                          [CLICK 
                          HERE] 
 
                        - M. Makeev and A. Madhukar, "Simulations of 
                          Atomic Level Stresses in Systems of Buried Ge/Si Islands." 
                          Physical Review Letters 86, 5542 (2001) [CLICK 
                          HERE]
 
                        - X. Su, R.K. Kalia, A. Nakano, P. Vashishta, A. 
                          Madhukar, "Million-atom molecular dynamics simulation 
                          of flat InAs overlayers with Self-limiting thickness 
                          on GaAs square nanomesas." Applied Physics Letters 
                          78, 3717 (2001) [CLICK 
                          HERE]
 
                        - X. Su, R.K. Kalia, A. Nakano, P. Vashishta, and 
                          A. Madhukar, "Critical lateral size for stress 
                          domain formation in InAs/GaAs square nanomesas: A multimillion-atom 
                          molecular dynamics study." Applied Physics Letters 
                          79, 4457 (2001) [CLICK 
                          HERE]
 
                        - W. Yu and A. Madhukar, "Molecular Dynamics 
                          Study of Coherent Island Energetics, Stresses, and Strains 
                          in Highly Strained Epitaxy" Physical Review Letters 
                          79, 905 (1997) 
                          [CLICK HERE]
 
                        - A. Madhukar, W. Yu, R. Viswanathan, and P. Chen, 
                          "Some Computer Simulations of Semiconductor Thin 
                          Film Growth and Strain Relaxation in a Unified Atomistic 
                          and Kinetic Model. Mat. Res. Soc. Symp. Proc. v 408 
                          (1996) 
 
                                                     
                           
                          
                          
                          
                        
                        Self-Assembled Quantum 
                          Dots 
                        1. Anupam Madhukar, "Stress Engineered Quantum 
                          dots: Nature's Way," in "Nano Optoelctronics: 
                          Concepts, Physics, and Devices", Ed. M. Grundmann, 
                          Springer-Verlag, (Berline 2002).  
                        2. I. Mukhametzhanov, Z. Wei, R. Heitz, and A. Madhukar, 
                          "Punctuated island growth: An approach to examination 
                          and control of quantum dot density, size, and shape 
                          evolution." Applied Physics Letters 75, 85 (1999) 
                          [CLICK 
                          HERE] 
                        3. R. Heitz, I. Mukhametzhanov, O. Stier, A. Madhukar, 
                          and D. Bimberg, "Enhanced Polar Exciton-LO-Phonon 
                          Interaction in Quantum Dots." Physical Review Letters 
                          83, 4654 (1999) [CLICK 
                          HERE] 
                        4. I. Mukhametzhanov, R. Heitz, J. Zeng, P. Chen, and 
                          A. Madhukar, "Independent manipulation of density 
                          and size of stress-driven self-assembled quantum dots." 
                          Applied Physics Letters 73, 1841 (1998) [CLICK 
                          HERE] 
                        5. R. Heitz, I. Mukhametzhanov, P. Chen, and A. Madhukar, 
                          "Excitation transfer in self-organized asymmetric 
                          quantum dot pairs."  
                          Physical Review B 58, R10151 (1998) [CLICK 
                          HERE] 
                        6.Anupam Madhukar, "A unified atomistic and kinetic 
                          framework for growth front morphology evolution and 
                          defect initiation in strained epitaxy." Journal 
                          of Crystal Growth 163, 149 (1996) [CLICK 
                          HERE] 
                        7. Q. Xie, A. Kalburge, P. Chen, and A. Madhukar, "Observation 
                          of lasing from vertically self-organized InAs three-dimensional 
                          island quantum boxes on GaAs(001)." IEEE Photonics 
                          Technology Letters 8, 965 (1996) [CLICK 
                          HERE] 
                        8. N. P. Kobayashi, T. R. Ramachandran, P. Chen, and 
                          A. Madhukar, "In situ, atomic force microscope 
                          studies of the evolution of InAs three-dimensional islands 
                          on GaAs(001)" Applied Physics Letters 68, 3299 
                          (1996) [CLICK 
                          HERE] 
                        9. Q. Xie, A. Madhukar, P. Chen, and N. Nobayashi "Vertically 
                          Self-Organized InAs Quantum Box Islands on GaAs (100)" 
                           
                          Physical Review Letters 75, 2542 (1995) [HIGHLY 
                          CITED! CLICK HERE] 
                        10. Q. H. Xie, P. Chenl, A. Madhukar, "InAs island-induced-strain 
                          driven adatom migration during GaAs overlayer growth." 
                          Applied Physics Letters 65, 2051 (1994). [CLICK 
                          HERE] 
                          
                         Quantum Dot Infrared 
                          Detectors  
                        1. T. Asano, C. Hu, Y. Zhang, M. Liu, J.C. Campbell, 
                          and A. Madhukar, "Design Consideration and Demonstration 
                          of Resonant-Cavity-Enhanced Quantum Dot Infrared Photodetectors 
                          in Mid-Infrared Wavelength Regime (3-5 micron)." 
                          IEEE J. of Quantum Electronics, 46, 1484 (2010) [CLICK 
                          HERE] 
                         
                        2. T. Asano, Z. Fang, and A. Madhukar, "Deep levels 
                          in GaAs(001)/InAs/InGaAs/GaAs self-assembled quantum 
                          dot structures and their effect of quantum dot devides." 
                          J. of Applied Physics, 107, 073111 (2010) [CLICK 
                          HERE] 
                        3. T. Asano, A. Madhukar, K. Mahalingham, G.J. Brown, 
                          "Dark current and band profiles in low defect density 
                          thick multilayered GaAs/InAs self-assembled quantum 
                          dot structures fro infrared detectors" J. Appl. 
                          Phys, 104, 113115 (2008) [CLICK 
                          HERE] 
                        4. J. C. Campbell and A. Madhukar, "Quantum Dot 
                          Infrared Detectors." IEEE Quantum Electronics, 
                          95 (2007) [CLICK 
                          HERE] 
                        5. Anupam Madhukar and Joe C. Campbell, "Quantum 
                          Dot Infrared Detectors" in "Semiconductor 
                          Nanostructures for Optoelectronic Applications". 
                          Ed. T. Steiner, Artec House Inc. (Norwood, MA) ch. 3. 
                          (2004)  
                        6. Z. Ye, J.C. Campbell, Z. Chen, E.T. Kim, and A. 
                          Madhukar, "Noise and photoconductive gain in InAs 
                          quantum-dot infrared photodetectors." Applied Physics 
                          Letters 83, 1234 (2003) [CLICK 
                          HERE] 
                        7. E.T. Kim, Z. Chen, and A. Madhukar, "Selective 
                          manipulation of InAs quantum dot electronic states using 
                          a lateral potential confinement layer." Applied 
                          Physics Letters 81, 3473 (2002) [CLICK 
                          HERE] 
                        8. E.T. Kim, Z. Chen, M. Ho, and A. Madhukar, "Tailoring 
                          mid- and long-wavelength dual response of InAs quantum-dot 
                          infrared photodetectors using InxGa1-xAs capping layers" 
                          Journal of Vacuum Science and Technology B 20, 1188 
                          (2002) [CLICK 
                          HERE] 
                        9. Z. Ye, J.C. Campbell, Z. Chen, E.T. Kim, and A. 
                          Madhukar, "Voltage-controllable multiwavelength 
                          InAs quantum-dot infrared photodetectors for mid- and 
                          far-infrared detection." Journal of Applied Physics 
                          92, 4141 (2002) [CLICK 
                          HERE] 
                        10. Z. Ye, J.C. Campbell, Z. Chen, E.T. Kim, and A. 
                          Madhukar, "Normal-incidence InAs self-assembled 
                          quantum-dot infrared photodetectors with a high detectivity." 
                          IEEE Journal of Quantum Electronics 38 1234, (2002) 
                          [CLICK 
                          HERE]  
                        11. Z.H. Chen, O. Baklenov, E.T. Kim, I. Mukhametzhanov, 
                          J. Tie, A. Madhukar, Z. Ye, and J.C. Campbell, "InAs/AlxGa1-xAs 
                          quantum dot infrared photodetectors with undoped active 
                          region" Infrared Physics and Technology 42, 479 
                          (2001) [CLICK 
                          HERE] 
                        12. E.T. Kim, Z. Chen, and A. Madhukar, "Tailoring 
                          detection bands of InAs quantum-dot infrared photodetectors 
                          using InxGa1-xAs strain-relieving quantum wells." 
                          Applied Physics Letters 79, 3341 (2001) [CLICK 
                          HERE]  
                                                  
                          Solar Energy Conversion 
                          using Novel Hybrid Nanostuctures 
                        1. Z. Lingley, S. Lu, and A. Madhukar "The dynamics of energy and charge transfer in lead sulfide quantum dot solids", Journal of Applied Physics, 115, 084302 (2014) [CLICK 
                        HERE] 
                         2. Z. Lingley, K. Mahalingam, S. Lu, G. J. Brown and A. Madhukar "Nanocrystal - Semiconductor Interface: Atomic-Resolution Cross-Sectional Transmission Electron Microscope Study of Lead Sulfide Nanocrystal Quantum Dots on Crystalline Silicon", Nano Research, 7, 219-227 (2014).                        [CLICK 
                          HERE] 
                         3. Z. Lingley, S. Lu. and A. Madhukar, "A High 
                          Quantum Efficiency Preserving Approach to Ligand Exchange 
                          on Lead Sulfide Quantum Dots and Interdot Resonant Energy 
                          Transfer" Nano Lett., 11, 2887-2891 (2011) [CLICK 
                            HERE]  
                        4. S. Lu, Z. Lingley, T. Asano, D. Harris, T. Barwicz, 
                          S. Guha, and A. Madhukar, " Photocurrent Induced 
                          by Nonradiative Energy Transfer from Nanocrystal Quantum 
                          Dots to Adjacent Silicon Nanowire Conducting Channels: 
                          Towards a New Solar Cell Paradigm" Nano Lett., 
                          9 , 4548-4552 (2009) [CLICK 
                          HERE] 
                        5. S. Lu and A. Madhukar, "Nonradiative Resonant 
                          Excitation Transfer from Nanocrystal Quantum Dots to 
                          Adjacent Quantum Channels". Nano Letters, 7 (11), 
                          3443 (2007) [CLICK 
                          HERE] 
                        6. A. Madhukar, S. Lu, A. Konkar, Y. Zhang, M. Ho, 
                          S. M. Hughes and A. P.Alivisatos, "Integrated Semiconductor 
                          Nanocrystal and Epitaxical Nanostructure Systems: Structural 
                          and Optical Behavior." Nano Letters, 5 , 479 (2005) 
                          [CLICK 
                          HERE]  
                        7. A. Konkar, S. Lu, A. Madhukar, S. M. Hughes and 
                          A. P. Alivisatos, "Semiconductor Nanocrystal Quantum 
                          Dots on Single Crystal Semiconductor Substrates: High 
                          Resolution Transmission Electron Microscopy." Nano 
                          Letters, 5 , 969 (2005) [CLICK 
                          HERE] 
                          
                        Biophysics, Bioengineering, 
                          and Nanomedicine: Imaging of Intracellular Dynamics 
                          and Cellular Prostheses 
                        1. S. Lu and A. Madhukar, “Inducing repetitive action potential firing in neurons via synthesized photoresponsive nanoscale cellular prostheses”, Nanomedicine Nanotechnology, Biology, and Medicine, 9, 293-301(2013).[CLICK 
                        HERE] 
                         2. J. K. Lee, S. Lu, and A. Madhukar, "Real-Time 
                          Dynamics of Ca2+, Caspase-3/7, and Morphological Changes 
                          in Retinal Ganglion Cell Apoptosis under Elevated Pressure." 
                          PLoS ONE, 5, e13437 (2010) [CLICK 
                            HERE] 
                        3. S. Lu and A. Madhukar, "Cellular prostheses: 
                          functional abiotic nanosystems to proble, manipulate, 
                          and endow functions in live cells." Nanomedicine: 
                          Nanotechnoloty, Biology, and Medicine, 6, 409-418 (2010) 
                          [CLICK 
                          HERE] 
                        4. Siyuan Lu, Anubhuti Bansal, Walid Soussou, Theodore 
                          W. Berger, and Anupam Madhukar, "Receptor-Ligand-Based 
                          Specific Cell Adhesion on Solid Surfaces: Hippocampal 
                          Neuronal Cells on Bilinker Functionalized Glass." 
                          Nano Letters, 6 , 1977 (2006) [CLICK 
                          HERE] 
                          
                        
                        Nanoparticle 
                          Manipulation on Surfaces 
                        1. S. Meltzer, R. Resch, B.E. Koel, M.E. Thompson, 
                          A. Madhukar, A.A.G. Requicha, and P. Will, "Fabrication 
                          of nanostructures by hydroxylamine seeding of gold nanoparticle 
                          templates." Langmuir 17, 1713 (2001) [CLICK 
                          HERE] 
                        2. Roland Resch, Christof Baur, Alejandro Bugacov, 
                          Bruce E. Koel, Pierre M. Echternach, Anupam Madhukar, 
                          Nicolas Montoya, Aristides A. G. Requicha, and Peter 
                          Will, "Linking and Manipulation of Gold Multinanoparticle 
                          Structures Using Dithiols and Scanning Force Microscopy." 
                          Journal of Physical Chemistry B 103, 3647 (1999) [CLICK 
                          HERE] 
                        3. T R Ramachandran, C Baur, A Bugacov, A Madhukar, 
                          B E Koel, A Requicha and C Gazen, "Direct and controlled 
                          manipulation of nanometer-sized particles using the 
                          non-contact atomic force microscope." Nanotechnology 
                          9, 237 (1998) [CLICK 
                          HERE] 
                          
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